Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC96Q2M329 PLGLA-201ENST00000465668 449 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 MTND2P14-201ENST00000482139 351 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC96Q2M329 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC96Q2M329 AC034244.1-201ENST00000507687 207 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC96Q2M329 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 AC145350.1-201ENST00000567426 208 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 AP001029.3-201ENST00000588063 596 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 AC024220.1-201ENST00000603675 484 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 AC244100.1-202ENST00000621554 382 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 AC087821.2-201ENST00000637086 450 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 NUP58P1-201ENST00000502546 1738 ntBASIC4.28□□□□□ -1.72
CCDC96Q2M329 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC96Q2M329 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC96Q2M329 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC96Q2M329 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC96Q2M329 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC96Q2M329 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC007823.1-201ENST00000569932 1566 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC006504.1-201ENST00000562493 3666 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC96Q2M329 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC96Q2M329 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC96Q2M329 SNORA51.6-201ENST00000384151 125 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 EI24P2-201ENST00000397776 1076 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 RNU4-65P-201ENST00000410473 140 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 AL136133.1-201ENST00000413694 376 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC093578.1-201ENST00000415219 368 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 HMGB3P20-201ENST00000417997 600 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 USP9YP25-201ENST00000457708 443 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 RNU1-61P-201ENST00000516107 151 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC092747.2-201ENST00000545069 983 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AL121766.1-201ENST00000547436 487 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC008127.2-201ENST00000549925 1075 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 AL845331.3-202ENST00000562856 261 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 BRDTP1-201ENST00000605735 677 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 U3.45-201ENST00000607547 219 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC012314.7-201ENST00000619693 93 ntBASIC4.27□□□□□ -1.73
CCDC96Q2M329 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC96Q2M329 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC96Q2M329 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC96Q2M329 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC96Q2M329 PRO1804-201ENST00000623780 2050 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC96Q2M329 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 MIR217-201ENST00000384817 110 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC96Q2M329 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 BOLA3P4-201ENST00000418151 400 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC068533.1-201ENST00000418542 415 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 Z93242.1-201ENST00000427102 353 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 RPS6P15-201ENST00000431996 751 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 PTENP1-201ENST00000447117 1215 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC010655.1-201ENST00000449336 292 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC106707.2-201ENST00000484182 374 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC006499.5-201ENST00000505037 514 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 TRAV15-201ENST00000556680 249 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC022662.1-201ENST00000580252 331 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 MIR3922-201ENST00000585192 84 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC96Q2M329 XIAPP1-201ENST00000603162 600 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC010591.1-201ENST00000603941 649 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC055876.5-201ENST00000605667 259 ntBASIC4.26□□□□□ -1.73
CCDC96Q2M329 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms