Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 AC233263.1-201ENST00000578059 224 ntBASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 MIR4651-201ENST00000582622 73 ntBASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 AC004264.1-201ENST00000608354 794 ntBASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 AC073648.6-201ENST00000641589 218 ntBASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DRB4X5D2U9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DRB4X5D2U9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 AC128676.1-201ENST00000454392 318 ntBASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 FAM201B-201ENST00000458407 597 ntBASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 NEFHP1-201ENST00000412845 2629 ntBASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DRB4X5D2U9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms