Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 MMP23A-201ENST00000234610 1017 ntBASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL4A3BPQ9Y5P4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 B3GAT3P1-201ENST00000471720 806 ntBASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 LINC01023-201ENST00000606054 436 ntBASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 AC133561.5-201ENST00000635547 218 ntBASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 AC104417.2-201ENST00000562989 1793 ntBASIC21.46■■□□□ 1.03
COL4A3BPQ9Y5P4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL4A3BPQ9Y5P4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 AC011506.1-201ENST00000474329 610 ntBASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL4A3BPQ9Y5P4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 MIR1238-201ENST00000408483 83 ntBASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL4A3BPQ9Y5P4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 AL032819.2-201ENST00000624543 2162 ntBASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.43■■□□□ 1.02
COL4A3BPQ9Y5P4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 AL390955.1-201ENST00000428694 934 ntBASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.42■■□□□ 1.02
COL4A3BPQ9Y5P4 RCC2P6-201ENST00000526625 1557 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms