Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB11Q9Y5F2 BX323043.1-201ENST00000641006 1765 ntBASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 AL031985.4-201ENST00000642138 673 ntBASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 AC018445.3-201ENST00000624177 1945 ntBASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 AC005332.7-201ENST00000614046 2005 ntBASIC18.78■□□□□ 0.6
PCDHB11Q9Y5F2 AC087289.5-201ENST00000586076 3175 ntBASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 AC116562.2-201ENST00000507042 360 ntBASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 FITM1-202ENST00000559294 800 ntBASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB11Q9Y5F2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PCDHB11Q9Y5F2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
PCDHB11Q9Y5F2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB11Q9Y5F2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB11Q9Y5F2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHB11Q9Y5F2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB11Q9Y5F2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB11Q9Y5F2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 AC093484.2-201ENST00000580996 2166 ntBASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 KRT8P9-201ENST00000558927 1449 ntBASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 LIN28AP1-201ENST00000429574 405 ntBASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms