Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB3Q9Y5E6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHB3Q9Y5E6 AC097493.4-201ENST00000641197 219 ntBASIC18.78■□□□□ 0.6
PCDHB3Q9Y5E6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB3Q9Y5E6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB3Q9Y5E6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB3Q9Y5E6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB3Q9Y5E6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB3Q9Y5E6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 MMP23A-201ENST00000234610 1017 ntBASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 TSPY15P-201ENST00000457163 923 ntBASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 AP002982.1-201ENST00000492365 877 ntBASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 AP006587.1-201ENST00000534129 1502 ntBASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PCDHB3Q9Y5E6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB3Q9Y5E6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB3Q9Y5E6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PCDHB3Q9Y5E6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PCDHB3Q9Y5E6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB3Q9Y5E6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB3Q9Y5E6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB3Q9Y5E6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB3Q9Y5E6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB3Q9Y5E6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB3Q9Y5E6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB3Q9Y5E6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms