Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AP001271.2-201ENST00000624018 1556 ntBASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AC097381.1-201ENST00000429019 1296 ntBASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AC012414.1-201ENST00000556676 535 ntBASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 RARRES2P11-201ENST00000635158 484 ntBASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.22■□□□□ 0.51
LRCH1Q9Y2L9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH1Q9Y2L9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRCH1Q9Y2L9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms