Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 AL353719.1-201ENST00000566847 864 ntBASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 AL031432.5-201ENST00000641059 760 ntBASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX2IPQ9Y2D8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 AC117947.1-201ENST00000427448 529 ntBASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 COX11P1-201ENST00000489116 835 ntBASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 AL023803.3-201ENST00000615559 522 ntBASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX2IPQ9Y2D8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 FAM8A6P-201ENST00000407496 1135 ntBASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SSX2IPQ9Y2D8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSX2IPQ9Y2D8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms