Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RNF6Q9Y252 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 AC012618.2-201ENST00000428058 849 ntBASIC18.04■□□□□ 0.48
RNF6Q9Y252 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 AC005829.2-201ENST00000571422 1056 ntBASIC18.04■□□□□ 0.48
RNF6Q9Y252 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 AC124016.1-201ENST00000609552 612 ntBASIC18.04■□□□□ 0.48
RNF6Q9Y252 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.04■□□□□ 0.48
RNF6Q9Y252 AL356652.1-201ENST00000615962 565 ntBASIC18.04■□□□□ 0.48
RNF6Q9Y252 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF6Q9Y252 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RNF6Q9Y252 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 RPS2P55-201ENST00000397318 883 ntBASIC18.03■□□□□ 0.48
RNF6Q9Y252 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 AC239809.2-201ENST00000415381 517 ntBASIC18.03■□□□□ 0.48
RNF6Q9Y252 AC107956.1-201ENST00000494359 873 ntBASIC18.03■□□□□ 0.48
RNF6Q9Y252 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 REXO1L12P-201ENST00000622156 912 ntBASIC18.03■□□□□ 0.48
RNF6Q9Y252 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF6Q9Y252 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF6Q9Y252 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RNF6Q9Y252 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF6Q9Y252 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RNF6Q9Y252 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF6Q9Y252 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF6Q9Y252 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF6Q9Y252 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RNF6Q9Y252 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF6Q9Y252 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF6Q9Y252 AL390719.1-204ENST00000412397 1219 ntBASIC18.02■□□□□ 0.48
RNF6Q9Y252 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF6Q9Y252 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF6Q9Y252 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF6Q9Y252 AC133681.1-201ENST00000465482 601 ntBASIC18.02■□□□□ 0.48
RNF6Q9Y252 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF6Q9Y252 AC233702.5-201ENST00000584107 538 ntBASIC18.02■□□□□ 0.48
RNF6Q9Y252 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF6Q9Y252 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF6Q9Y252 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF6Q9Y252 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF6Q9Y252 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF6Q9Y252 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF6Q9Y252 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RNF6Q9Y252 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF6Q9Y252 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF6Q9Y252 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.02■□□□□ 0.47
RNF6Q9Y252 AC138932.1-201ENST00000534164 6830 ntBASIC18.01■□□□□ 0.47
RNF6Q9Y252 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF6Q9Y252 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF6Q9Y252 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms