Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 NPAP1P7-201ENST00000613027 823 ntBASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDK11AQ9UQ88 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDK11AQ9UQ88 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 AL645929.1-201ENST00000420084 975 ntBASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 EFS-203ENST00000429593 2610 ntTSL 2 BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDK11AQ9UQ88 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.33
CDK11AQ9UQ88 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC29.64■■■□□ 2.33
CDK11AQ9UQ88 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.33
CDK11AQ9UQ88 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 GABARAPL3-202ENST00000624044 1851 ntBASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC29.63■■■□□ 2.33
CDK11AQ9UQ88 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC29.62■■■□□ 2.33
CDK11AQ9UQ88 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CDK11AQ9UQ88 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 VPS72-207ENST00000640458 689 ntTSL 5 BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 GPAT2P1-201ENST00000444924 1672 ntBASIC29.6■■■□□ 2.33
CDK11AQ9UQ88 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 AC092597.1-201ENST00000487352 616 ntBASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms