Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 CRYGFP-201ENST00000418459 633 ntBASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 AC097488.1-201ENST00000507834 756 ntBASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 KRT18P35-201ENST00000510488 1269 ntBASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 AC125437.2-201ENST00000625180 2167 ntBASIC17.69■□□□□ 0.42
NPIPA1Q9UND3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 AL590326.2-201ENST00000625139 305 ntBASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA1Q9UND3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 TERF1P1-201ENST00000311003 1181 ntBASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 DGCR10-201ENST00000609839 495 ntBASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 AL158211.5-201ENST00000623583 2518 ntBASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA1Q9UND3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms