Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 ZNF815P-204ENST00000434898 1737 ntBASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 AC069148.1-201ENST00000608741 768 ntBASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 CR769767.2-201ENST00000622735 460 ntBASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.12■□□□□ 0.97
GTF2IRD1Q9UHL9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 SPDYE15P-201ENST00000424157 909 ntBASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 TSPY23P-201ENST00000440136 739 ntBASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 LINC01311-201ENST00000565162 1445 ntBASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
GTF2IRD1Q9UHL9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 AC092667.1-201ENST00000434301 2586 ntBASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF2IRD1Q9UHL9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 DUSP5P1-201ENST00000441325 1139 ntBASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 HCG4P8-203ENST00000443049 980 ntBASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF2IRD1Q9UHL9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms