Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCDNQ9UBB6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCDNQ9UBB6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NCDNQ9UBB6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NCDNQ9UBB6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.02■□□□□ 0.63
NCDNQ9UBB6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
NCDNQ9UBB6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NCDNQ9UBB6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 KRT8P8-201ENST00000434750 1448 ntBASIC19.01■□□□□ 0.63
NCDNQ9UBB6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 AC092597.1-201ENST00000487352 616 ntBASIC19.01■□□□□ 0.63
NCDNQ9UBB6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 SLC25A6P4-201ENST00000586535 553 ntBASIC19.01■□□□□ 0.63
NCDNQ9UBB6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 DPP3P2-201ENST00000416030 1696 ntBASIC19.01■□□□□ 0.63
NCDNQ9UBB6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCDNQ9UBB6 KRT18P1-202ENST00000452408 1331 ntBASIC19■□□□□ 0.63
NCDNQ9UBB6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19■□□□□ 0.63
NCDNQ9UBB6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NCDNQ9UBB6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19■□□□□ 0.63
NCDNQ9UBB6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 AP002469.2-201ENST00000531724 424 ntBASIC19■□□□□ 0.63
NCDNQ9UBB6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19■□□□□ 0.63
NCDNQ9UBB6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19■□□□□ 0.63
NCDNQ9UBB6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCDNQ9UBB6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NCDNQ9UBB6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19■□□□□ 0.63
NCDNQ9UBB6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 AC106795.1-205ENST00000512851 1056 ntBASIC18.99■□□□□ 0.63
NCDNQ9UBB6 AP000867.3-201ENST00000524675 377 ntBASIC18.99■□□□□ 0.63
NCDNQ9UBB6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 TMEM179-206ENST00000616017 1645 ntBASIC18.99■□□□□ 0.63
NCDNQ9UBB6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCDNQ9UBB6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.98■□□□□ 0.63
NCDNQ9UBB6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCDNQ9UBB6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
NCDNQ9UBB6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
NCDNQ9UBB6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.98■□□□□ 0.63
NCDNQ9UBB6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms