Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.96■□□□□ 0.63
MKS1Q9NXB0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 AC006557.6-201ENST00000623071 864 ntBASIC18.95■□□□□ 0.62
MKS1Q9NXB0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.95■□□□□ 0.62
MKS1Q9NXB0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 AL162741.1-201ENST00000565563 1558 ntBASIC18.94■□□□□ 0.62
MKS1Q9NXB0 ABALON-201ENST00000629058 1903 ntBASIC18.94■□□□□ 0.62
MKS1Q9NXB0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 AF201337.1-201ENST00000520239 748 ntBASIC18.94■□□□□ 0.62
MKS1Q9NXB0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.94■□□□□ 0.62
MKS1Q9NXB0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 AC004911.1-201ENST00000416316 871 ntBASIC18.93■□□□□ 0.62
MKS1Q9NXB0 TSPY21P-201ENST00000433481 731 ntBASIC18.93■□□□□ 0.62
MKS1Q9NXB0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 AL050303.2-201ENST00000619798 666 ntBASIC18.93■□□□□ 0.62
MKS1Q9NXB0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MKS1Q9NXB0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 TUBB8P6-201ENST00000436895 1288 ntBASIC18.92■□□□□ 0.62
MKS1Q9NXB0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.92■□□□□ 0.62
MKS1Q9NXB0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 AC105036.2-201ENST00000569468 176 ntBASIC18.92■□□□□ 0.62
MKS1Q9NXB0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MKS1Q9NXB0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms