Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 AC004980.1-204ENST00000429707 299 ntBASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 TSPY21P-201ENST00000433481 731 ntBASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 Z85996.1-201ENST00000494644 937 ntBASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 AP001412.1-201ENST00000608405 714 ntBASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 CR392000.1-201ENST00000624770 1228 ntBASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 AL031985.4-201ENST00000642138 673 ntBASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN4Q9NRR5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBQLN4Q9NRR5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBQLN4Q9NRR5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 RPS2P55-201ENST00000397318 883 ntBASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 AC107956.1-201ENST00000494359 873 ntBASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 AC026271.3-201ENST00000571884 352 ntBASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN4Q9NRR5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 KRT8P41-201ENST00000533985 1514 ntBASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 AC012618.2-201ENST00000428058 849 ntBASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms