Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CTPS2Q9NRF8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTPS2Q9NRF8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.85■□□□□ 0.45
CTPS2Q9NRF8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 POM121L13P-201ENST00000422362 380 ntBASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 AC026366.1-201ENST00000488803 879 ntBASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 CD99P1-205ENST00000527459 561 ntBASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 ZNF815P-204ENST00000434898 1737 ntBASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTPS2Q9NRF8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTPS2Q9NRF8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTPS2Q9NRF8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTPS2Q9NRF8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTPS2Q9NRF8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTPS2Q9NRF8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTPS2Q9NRF8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 AL121829.2-201ENST00000620908 328 ntBASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTPS2Q9NRF8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 ESRRAP1-201ENST00000400596 1257 ntBASIC17.81■□□□□ 0.44
CTPS2Q9NRF8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms