Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.35■□□□□ 0.85
TLR9Q9NR96 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TLR9Q9NR96 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.35■□□□□ 0.85
TLR9Q9NR96 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.35■□□□□ 0.85
TLR9Q9NR96 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.35■□□□□ 0.85
TLR9Q9NR96 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.35■□□□□ 0.85
TLR9Q9NR96 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TLR9Q9NR96 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.35■□□□□ 0.85
TLR9Q9NR96 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TLR9Q9NR96 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TLR9Q9NR96 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 MIR4674-201ENST00000582457 87 ntBASIC20.34■□□□□ 0.85
TLR9Q9NR96 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.34■□□□□ 0.85
TLR9Q9NR96 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TLR9Q9NR96 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 AC009237.14-201ENST00000609975 1594 ntBASIC20.34■□□□□ 0.85
TLR9Q9NR96 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TLR9Q9NR96 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TLR9Q9NR96 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.33■□□□□ 0.85
TLR9Q9NR96 AC020907.5-201ENST00000624372 1936 ntBASIC20.33■□□□□ 0.85
TLR9Q9NR96 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TLR9Q9NR96 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TLR9Q9NR96 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TLR9Q9NR96 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TLR9Q9NR96 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TLR9Q9NR96 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.33■□□□□ 0.84
TLR9Q9NR96 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TLR9Q9NR96 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TLR9Q9NR96 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TLR9Q9NR96 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TLR9Q9NR96 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TLR9Q9NR96 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TLR9Q9NR96 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TLR9Q9NR96 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.84
TLR9Q9NR96 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TLR9Q9NR96 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TLR9Q9NR96 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.33■□□□□ 0.84
TLR9Q9NR96 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TLR9Q9NR96 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.32■□□□□ 0.84
TLR9Q9NR96 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 SPDYE13P-201ENST00000445314 798 ntBASIC20.32■□□□□ 0.84
TLR9Q9NR96 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.32■□□□□ 0.84
TLR9Q9NR96 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.32■□□□□ 0.84
TLR9Q9NR96 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TLR9Q9NR96 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TLR9Q9NR96 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.32■□□□□ 0.84
TLR9Q9NR96 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TLR9Q9NR96 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.32■□□□□ 0.84
TLR9Q9NR96 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TLR9Q9NR96 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.31■□□□□ 0.84
TLR9Q9NR96 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TLR9Q9NR96 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms