Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
KLHL1Q9NR64 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 KRT18P21-201ENST00000515767 1272 ntBASIC18.05■□□□□ 0.48
KLHL1Q9NR64 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 AC018553.1-201ENST00000616682 1458 ntBASIC18.05■□□□□ 0.48
KLHL1Q9NR64 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHL1Q9NR64 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 AC116351.2-201ENST00000606540 1585 ntBASIC18.04■□□□□ 0.48
KLHL1Q9NR64 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL1Q9NR64 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 AC125437.2-201ENST00000625180 2167 ntBASIC18.03■□□□□ 0.48
KLHL1Q9NR64 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 NUDT16P1-203ENST00000513809 620 ntBASIC18.03■□□□□ 0.48
KLHL1Q9NR64 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 AL353708.3-201ENST00000610272 989 ntBASIC18.03■□□□□ 0.48
KLHL1Q9NR64 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.03■□□□□ 0.48
KLHL1Q9NR64 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 AL158211.5-201ENST00000623583 2518 ntBASIC18.02■□□□□ 0.48
KLHL1Q9NR64 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL1Q9NR64 TFP1-202ENST00000475455 1573 ntBASIC18.02■□□□□ 0.48
KLHL1Q9NR64 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms