Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC011558.1-201ENST00000623459 338 ntBASIC19.84■□□□□ 0.77
HPS4Q9NQG7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HPS4Q9NQG7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.83■□□□□ 0.77
HPS4Q9NQG7 AP005212.1-201ENST00000581547 1997 ntBASIC19.83■□□□□ 0.77
HPS4Q9NQG7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HPS4Q9NQG7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HPS4Q9NQG7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HPS4Q9NQG7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.83■□□□□ 0.77
HPS4Q9NQG7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.83■□□□□ 0.77
HPS4Q9NQG7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
HPS4Q9NQG7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.83■□□□□ 0.76
HPS4Q9NQG7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HPS4Q9NQG7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HPS4Q9NQG7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.83■□□□□ 0.76
HPS4Q9NQG7 RNF165-205ENST00000588679 2904 ntBASIC19.83■□□□□ 0.76
HPS4Q9NQG7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HPS4Q9NQG7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HPS4Q9NQG7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HPS4Q9NQG7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HPS4Q9NQG7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HPS4Q9NQG7 AC009237.14-201ENST00000609975 1594 ntBASIC19.83■□□□□ 0.76
HPS4Q9NQG7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.82■□□□□ 0.76
HPS4Q9NQG7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 AC007952.6-201ENST00000573168 2673 ntBASIC19.82■□□□□ 0.76
HPS4Q9NQG7 AC003957.1-201ENST00000625108 2673 ntBASIC19.82■□□□□ 0.76
HPS4Q9NQG7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.82■□□□□ 0.76
HPS4Q9NQG7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 AL162377.1-201ENST00000618844 1793 ntBASIC19.81■□□□□ 0.76
HPS4Q9NQG7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.81■□□□□ 0.76
HPS4Q9NQG7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 UPK3BP1-201ENST00000428678 509 ntBASIC19.8■□□□□ 0.76
HPS4Q9NQG7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 AP003041.3-201ENST00000527151 707 ntBASIC19.8■□□□□ 0.76
HPS4Q9NQG7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms