Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 POM121L13P-201ENST00000422362 380 ntBASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 UNC93B5-201ENST00000530315 699 ntBASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 IRX1P1-201ENST00000438849 1838 ntBASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLRC4Q9NPP4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 AC008403.3-201ENST00000598924 454 ntBASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
NLRC4Q9NPP4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
NLRC4Q9NPP4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.77■□□□□ 0.91
NLRC4Q9NPP4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.77■□□□□ 0.91
NLRC4Q9NPP4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 AL138781.2-201ENST00000617896 1843 ntBASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms