Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KIAA1549Q9HCM3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KIAA1549Q9HCM3 DUX4L26-201ENST00000489078 1255 ntBASIC17.13■□□□□ 0.33
KIAA1549Q9HCM3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KIAA1549Q9HCM3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KIAA1549Q9HCM3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KIAA1549Q9HCM3 KRT8P11-201ENST00000409686 1436 ntBASIC17.13■□□□□ 0.33
KIAA1549Q9HCM3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KIAA1549Q9HCM3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.13■□□□□ 0.33
KIAA1549Q9HCM3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 AC104076.2-201ENST00000448912 469 ntBASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 AC128688.1-201ENST00000487626 519 ntBASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 PRSS44-201ENST00000515154 1146 ntBASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 NTF6B-201ENST00000591913 560 ntBASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 AC130371.2-201ENST00000619443 611 ntBASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 AC116562.4-201ENST00000641316 2276 ntBASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.12■□□□□ 0.33
KIAA1549Q9HCM3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 AC005363.2-201ENST00000618631 242 ntBASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.11■□□□□ 0.33
KIAA1549Q9HCM3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 AC007952.6-201ENST00000573168 2673 ntBASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 AC003957.1-201ENST00000625108 2673 ntBASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 AL032819.2-201ENST00000624543 2162 ntBASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 HMGA1P5-201ENST00000412453 271 ntBASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.1■□□□□ 0.33
KIAA1549Q9HCM3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 FAM87A-204ENST00000613235 858 ntBASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KIAA1549Q9HCM3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms