Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.89■□□□□ 0.46
CHD8Q9HCK8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHD8Q9HCK8 AL049840.3-201ENST00000602669 611 ntBASIC17.89■□□□□ 0.46
CHD8Q9HCK8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.89■□□□□ 0.46
CHD8Q9HCK8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.89■□□□□ 0.46
CHD8Q9HCK8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHD8Q9HCK8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 AL160286.2-201ENST00000567150 934 ntBASIC17.89■□□□□ 0.45
CHD8Q9HCK8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 AC104109.2-201ENST00000602919 1418 ntBASIC17.89■□□□□ 0.45
CHD8Q9HCK8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHD8Q9HCK8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 AL391807.1-203ENST00000604392 2365 ntBASIC17.88■□□□□ 0.45
CHD8Q9HCK8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 AC090616.6-201ENST00000582640 721 ntBASIC17.88■□□□□ 0.45
CHD8Q9HCK8 AC012645.4-201ENST00000610691 1061 ntBASIC17.88■□□□□ 0.45
CHD8Q9HCK8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 KRT8P11-201ENST00000409686 1436 ntBASIC17.88■□□□□ 0.45
CHD8Q9HCK8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD8Q9HCK8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.87■□□□□ 0.45
CHD8Q9HCK8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHD8Q9HCK8 AL136038.4-201ENST00000603606 1261 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms