Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRDQ9H2X0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHRDQ9H2X0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRDQ9H2X0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHRDQ9H2X0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 LINC00565-201ENST00000562710 2331 ntBASIC19.25■□□□□ 0.67
CHRDQ9H2X0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRDQ9H2X0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 AP002414.4-201ENST00000589764 1148 ntBASIC19.24■□□□□ 0.67
CHRDQ9H2X0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRDQ9H2X0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 KRT8P26-201ENST00000534154 1276 ntBASIC19.23■□□□□ 0.67
CHRDQ9H2X0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 IFNL4P1-201ENST00000607083 540 ntBASIC19.23■□□□□ 0.67
CHRDQ9H2X0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDQ9H2X0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.22■□□□□ 0.67
CHRDQ9H2X0 AC009237.14-201ENST00000609975 1594 ntBASIC19.22■□□□□ 0.67
CHRDQ9H2X0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms