Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 AC091874.3-201ENST00000512672 1195 ntBASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 HLA-B-256ENST00000639848 1089 ntBASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 AC104581.1-202ENST00000635932 2618 ntBASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 TUBB8P6-201ENST00000436895 1288 ntBASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 CDCA4P2-201ENST00000441182 718 ntBASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 AL121829.2-201ENST00000620908 328 ntBASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 AL354751.1-201ENST00000412768 1863 ntBASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHACTR1Q9C0D0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 MIR663A-201ENST00000385250 93 ntBASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 TSPY21P-201ENST00000433481 731 ntBASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 ANO7L1-203ENST00000602586 1720 ntBASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHACTR1Q9C0D0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 AC026185.1-201ENST00000445748 174 ntBASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHACTR1Q9C0D0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms