Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM56Q9BRZ2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRIM56Q9BRZ2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM56Q9BRZ2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 CROCCP3-202ENST00000420820 1947 ntBASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 AL121906.2-201ENST00000621597 723 ntBASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM56Q9BRZ2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 FP475955.4-201ENST00000623131 1990 ntBASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 AC006333.2-201ENST00000607957 2099 ntBASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM56Q9BRZ2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM56Q9BRZ2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM56Q9BRZ2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 AC008687.6-201ENST00000596318 630 ntBASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 AC133041.1-202ENST00000642053 222 ntBASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM56Q9BRZ2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms