Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM2D3Q9BRN9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TM2D3Q9BRN9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM2D3Q9BRN9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TM2D3Q9BRN9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.83□□□□□ -0.2
TM2D3Q9BRN9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM2D3Q9BRN9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TM2D3Q9BRN9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 MIR4674-201ENST00000582457 87 ntBASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC13.82□□□□□ -0.2
TM2D3Q9BRN9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 AC034232.1-201ENST00000506026 1064 ntBASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 CR769767.2-201ENST00000622735 460 ntBASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TM2D3Q9BRN9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 AL691432.2-201ENST00000607222 2038 ntBASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 HBZP1-201ENST00000354915 429 ntBASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 SPDYE13P-201ENST00000445314 798 ntBASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM2D3Q9BRN9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms