Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 AC026271.3-201ENST00000571884 352 ntBASIC19.48■□□□□ 0.71
SEMA3CQ99985 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SEMA3CQ99985 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3CQ99985 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3CQ99985 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.47■□□□□ 0.71
SEMA3CQ99985 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SEMA3CQ99985 ECEL1P3-201ENST00000427961 737 ntBASIC19.47■□□□□ 0.71
SEMA3CQ99985 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.47■□□□□ 0.71
SEMA3CQ99985 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.47■□□□□ 0.71
SEMA3CQ99985 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.47■□□□□ 0.71
SEMA3CQ99985 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3CQ99985 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3CQ99985 RCC2P6-201ENST00000526625 1557 ntBASIC19.47■□□□□ 0.71
SEMA3CQ99985 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3CQ99985 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3CQ99985 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3CQ99985 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.46■□□□□ 0.71
SEMA3CQ99985 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.46■□□□□ 0.71
SEMA3CQ99985 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SEMA3CQ99985 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SEMA3CQ99985 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SEMA3CQ99985 TSPY7P-201ENST00000431358 1114 ntBASIC19.46■□□□□ 0.71
SEMA3CQ99985 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 AC011506.1-201ENST00000474329 610 ntBASIC19.46■□□□□ 0.71
SEMA3CQ99985 NUDT16P1-203ENST00000513809 620 ntBASIC19.46■□□□□ 0.71
SEMA3CQ99985 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.46■□□□□ 0.71
SEMA3CQ99985 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.46■□□□□ 0.71
SEMA3CQ99985 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 AC141586.3-201ENST00000562166 1838 ntBASIC19.46■□□□□ 0.71
SEMA3CQ99985 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3CQ99985 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 AC004951.3-201ENST00000418645 1148 ntBASIC19.45■□□□□ 0.7
SEMA3CQ99985 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 SNORA78-201ENST00000459373 127 ntBASIC19.45■□□□□ 0.7
SEMA3CQ99985 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 MIR6786-201ENST00000616843 113 ntBASIC19.45■□□□□ 0.7
SEMA3CQ99985 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 REXO1L12P-201ENST00000622156 912 ntBASIC19.45■□□□□ 0.7
SEMA3CQ99985 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
SEMA3CQ99985 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA3CQ99985 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA3CQ99985 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA3CQ99985 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA3CQ99985 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA3CQ99985 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA3CQ99985 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms