Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 KRT8P17-201ENST00000453110 1448 ntBASIC17.78■□□□□ 0.44
TM9SF2Q99805 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.78■□□□□ 0.44
TM9SF2Q99805 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF2Q99805 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF2Q99805 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF2Q99805 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF2Q99805 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 Z99916.2-201ENST00000604037 246 ntBASIC17.77■□□□□ 0.44
TM9SF2Q99805 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TM9SF2Q99805 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM9SF2Q99805 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TM9SF2Q99805 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM9SF2Q99805 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM9SF2Q99805 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TM9SF2Q99805 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 RPS2P55-201ENST00000397318 883 ntBASIC17.76■□□□□ 0.43
TM9SF2Q99805 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 AC107956.1-201ENST00000494359 873 ntBASIC17.76■□□□□ 0.43
TM9SF2Q99805 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 RARRES2P10-201ENST00000564312 460 ntBASIC17.76■□□□□ 0.43
TM9SF2Q99805 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 MIR4497-201ENST00000583208 89 ntBASIC17.76■□□□□ 0.43
TM9SF2Q99805 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 AC233702.5-201ENST00000584107 538 ntBASIC17.76■□□□□ 0.43
TM9SF2Q99805 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF2Q99805 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TM9SF2Q99805 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
TM9SF2Q99805 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF2Q99805 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TM9SF2Q99805 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM9SF2Q99805 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms