Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 FP475955.4-201ENST00000623131 1990 ntBASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 TNXA-203ENST00000507684 2038 ntBASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 TSPY21P-201ENST00000433481 731 ntBASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 AC131212.4-201ENST00000623606 975 ntBASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSPG4P5Q96PW8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 TSPY23P-201ENST00000440136 739 ntBASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 FEM1AP3-201ENST00000403722 1741 ntBASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CSPG4P5Q96PW8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 KRT16P1-201ENST00000399124 1418 ntBASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 AC073195.1-201ENST00000607241 877 ntBASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 CR392000.1-201ENST00000624770 1228 ntBASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSPG4P5Q96PW8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CSPG4P5Q96PW8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG4P5Q96PW8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.76■□□□□ 0.75
CSPG4P5Q96PW8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CSPG4P5Q96PW8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG4P5Q96PW8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG4P5Q96PW8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.76■□□□□ 0.75
CSPG4P5Q96PW8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSPG4P5Q96PW8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms