Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 AL450487.1-201ENST00000426799 995 ntBASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 AL023973.1-201ENST00000624619 620 ntBASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 AC005332.1-201ENST00000577698 1310 ntBASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 AC009237.14-201ENST00000609975 1594 ntBASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC46A1Q96NT5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 AC112907.3-201ENST00000577781 2400 ntBASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC46A1Q96NT5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 AC026396.1-201ENST00000419388 421 ntBASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 AP003041.3-201ENST00000527151 707 ntBASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC46A1Q96NT5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 HCG4P8-203ENST00000443049 980 ntBASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC46A1Q96NT5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC46A1Q96NT5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SLC46A1Q96NT5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SLC46A1Q96NT5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC46A1Q96NT5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC46A1Q96NT5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms