Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 AC005837.3-201ENST00000612163 286 ntBASIC14.66□□□□□ -0.06
LINC00479Q96M42 AC100791.3-201ENST00000617619 330 ntBASIC14.66□□□□□ -0.06
LINC00479Q96M42 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 IRX1P1-201ENST00000438849 1838 ntBASIC14.66□□□□□ -0.06
LINC00479Q96M42 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LINC00479Q96M42 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00479Q96M42 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC00479Q96M42 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 RARRES2P4-201ENST00000514074 484 ntBASIC14.65□□□□□ -0.06
LINC00479Q96M42 AC023632.3-201ENST00000521633 145 ntBASIC14.65□□□□□ -0.06
LINC00479Q96M42 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC00479Q96M42 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LINC00479Q96M42 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00479Q96M42 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC00479Q96M42 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00479Q96M42 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00479Q96M42 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00479Q96M42 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.65□□□□□ -0.07
LINC00479Q96M42 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.65□□□□□ -0.07
LINC00479Q96M42 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
LINC00479Q96M42 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.64□□□□□ -0.07
LINC00479Q96M42 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 SDHAP1-207ENST00000440850 2000 ntBASIC14.64□□□□□ -0.07
LINC00479Q96M42 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00479Q96M42 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00479Q96M42 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms