Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.79■□□□□ 0.92
LRCH3Q96II8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
LRCH3Q96II8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
LRCH3Q96II8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH3Q96II8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.79■□□□□ 0.92
LRCH3Q96II8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.79■□□□□ 0.92
LRCH3Q96II8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH3Q96II8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH3Q96II8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH3Q96II8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH3Q96II8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 TOB2P1-201ENST00000469761 992 ntBASIC20.78■□□□□ 0.92
LRCH3Q96II8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 AC079416.2-201ENST00000625035 1193 ntBASIC20.78■□□□□ 0.92
LRCH3Q96II8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.78■□□□□ 0.92
LRCH3Q96II8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH3Q96II8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 AKR1C7P-201ENST00000305623 895 ntBASIC20.77■□□□□ 0.92
LRCH3Q96II8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 AC073648.2-201ENST00000510116 352 ntBASIC20.77■□□□□ 0.92
LRCH3Q96II8 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 AC106730.1-201ENST00000566722 1090 ntBASIC20.77■□□□□ 0.92
LRCH3Q96II8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH3Q96II8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.77■□□□□ 0.92
LRCH3Q96II8 KRT8P17-201ENST00000453110 1448 ntBASIC20.77■□□□□ 0.91
LRCH3Q96II8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRCH3Q96II8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LRCH3Q96II8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRCH3Q96II8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LRCH3Q96II8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH3Q96II8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH3Q96II8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH3Q96II8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH3Q96II8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH3Q96II8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH3Q96II8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH3Q96II8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH3Q96II8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH3Q96II8 AL162741.1-201ENST00000565563 1558 ntBASIC20.76■□□□□ 0.91
LRCH3Q96II8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.76■□□□□ 0.91
LRCH3Q96II8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH3Q96II8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
LRCH3Q96II8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH3Q96II8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH3Q96II8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH3Q96II8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH3Q96II8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRCH3Q96II8 TP73-AS1-207ENST00000624167 988 ntBASIC20.75■□□□□ 0.91
LRCH3Q96II8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH3Q96II8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms