Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 AL138781.2-201ENST00000617896 1843 ntBASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 RPPH1-201ENST00000516869 333 ntBASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 AC131212.4-201ENST00000623606 975 ntBASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM5Q96HC4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 AC093525.10-201ENST00000625130 1569 ntBASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 AL353807.1-201ENST00000427475 662 ntBASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 KSR1P1-201ENST00000446298 240 ntBASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 C1QBPP2-201ENST00000528754 825 ntBASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 HTR7P1-201ENST00000538670 1336 ntBASIC18.74■□□□□ 0.59
PDLIM5Q96HC4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 AC004980.1-204ENST00000429707 299 ntBASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 ITM2C-210ENST00000620962 501 ntBASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms