Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 AC004408.2-201ENST00000623613 2777 ntBASIC19.76■□□□□ 0.75
IFT43Q96FT9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 AC005082.1-201ENST00000413042 2259 ntBASIC19.76■□□□□ 0.75
IFT43Q96FT9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
IFT43Q96FT9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
IFT43Q96FT9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 TUBB8P6-201ENST00000436895 1288 ntBASIC19.75■□□□□ 0.75
IFT43Q96FT9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.75■□□□□ 0.75
IFT43Q96FT9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.75■□□□□ 0.75
IFT43Q96FT9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.75■□□□□ 0.75
IFT43Q96FT9 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.75■□□□□ 0.75
IFT43Q96FT9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
IFT43Q96FT9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
IFT43Q96FT9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IFT43Q96FT9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 KRT16P5-201ENST00000455284 522 ntBASIC19.74■□□□□ 0.75
IFT43Q96FT9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 AC004264.1-201ENST00000608354 794 ntBASIC19.74■□□□□ 0.75
IFT43Q96FT9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 AP000974.1-201ENST00000623909 2387 ntBASIC19.74■□□□□ 0.75
IFT43Q96FT9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFT43Q96FT9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.74■□□□□ 0.75
IFT43Q96FT9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.73■□□□□ 0.75
IFT43Q96FT9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.73■□□□□ 0.75
IFT43Q96FT9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
IFT43Q96FT9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.73■□□□□ 0.75
IFT43Q96FT9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.73■□□□□ 0.75
IFT43Q96FT9 AC113410.3-201ENST00000623366 203 ntBASIC19.73■□□□□ 0.75
IFT43Q96FT9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
IFT43Q96FT9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFT43Q96FT9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.73■□□□□ 0.75
IFT43Q96FT9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
IFT43Q96FT9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
IFT43Q96FT9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms