Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 AP000523.1-201ENST00000398242 1049 ntBASIC19.22■□□□□ 0.67
SIPA1Q96FS4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 AL359075.1-203ENST00000462729 1002 ntBASIC19.22■□□□□ 0.67
SIPA1Q96FS4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIPA1Q96FS4 AC104417.2-201ENST00000562989 1793 ntBASIC19.21■□□□□ 0.67
SIPA1Q96FS4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIPA1Q96FS4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.2■□□□□ 0.66
SIPA1Q96FS4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.2■□□□□ 0.66
SIPA1Q96FS4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 AL121956.5-201ENST00000625261 221 ntBASIC19.2■□□□□ 0.66
SIPA1Q96FS4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 AP000550.4-202ENST00000639755 178 ntBASIC19.2■□□□□ 0.66
SIPA1Q96FS4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SIPA1Q96FS4 ZNF815P-204ENST00000434898 1737 ntBASIC19.2■□□□□ 0.66
SIPA1Q96FS4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 AL671277.2-201ENST00000458060 996 ntBASIC19.19■□□□□ 0.66
SIPA1Q96FS4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms