Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE2Q96FN4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE2Q96FN4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE2Q96FN4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE2Q96FN4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 YBX1P10-201ENST00000444752 975 ntBASIC16.66■□□□□ 0.26
CPNE2Q96FN4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE2Q96FN4 AC007613.1-201ENST00000572811 2597 ntBASIC16.66■□□□□ 0.26
CPNE2Q96FN4 AC141586.3-201ENST00000562166 1838 ntBASIC16.66■□□□□ 0.26
CPNE2Q96FN4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 AC092118.2-201ENST00000613495 667 ntBASIC16.65■□□□□ 0.26
CPNE2Q96FN4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE2Q96FN4 AP006587.1-201ENST00000534129 1502 ntBASIC16.65■□□□□ 0.26
CPNE2Q96FN4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CPNE2Q96FN4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CPNE2Q96FN4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 SLC29A4P1-201ENST00000398760 971 ntBASIC16.64■□□□□ 0.25
CPNE2Q96FN4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 AL121832.2-201ENST00000610979 668 ntBASIC16.64■□□□□ 0.25
CPNE2Q96FN4 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE2Q96FN4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms