Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC091304.2-201ENST00000564639 760 ntBASIC19.19■□□□□ 0.66
CLDN23Q96B33 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN23Q96B33 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN23Q96B33 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN23Q96B33 GPAT2P1-201ENST00000444924 1672 ntBASIC19.19■□□□□ 0.66
CLDN23Q96B33 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN23Q96B33 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN23Q96B33 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN23Q96B33 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN23Q96B33 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN23Q96B33 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 TSPY22P-201ENST00000427496 604 ntBASIC19.18■□□□□ 0.66
CLDN23Q96B33 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.18■□□□□ 0.66
CLDN23Q96B33 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 SEC1P-202ENST00000473944 940 ntBASIC19.18■□□□□ 0.66
CLDN23Q96B33 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN23Q96B33 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN23Q96B33 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLDN23Q96B33 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLDN23Q96B33 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 AC079781.3-201ENST00000449110 356 ntBASIC19.17■□□□□ 0.66
CLDN23Q96B33 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN23Q96B33 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN23Q96B33 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLDN23Q96B33 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN23Q96B33 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN23Q96B33 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLDN23Q96B33 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN23Q96B33 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN23Q96B33 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN23Q96B33 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN23Q96B33 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 AL023284.2-201ENST00000405850 579 ntBASIC19.16■□□□□ 0.66
CLDN23Q96B33 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN23Q96B33 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 LINC01711-201ENST00000598340 967 ntBASIC19.16■□□□□ 0.66
CLDN23Q96B33 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN23Q96B33 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN23Q96B33 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN23Q96B33 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 KRT18P31-201ENST00000506277 1292 ntBASIC19.15■□□□□ 0.66
CLDN23Q96B33 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 AC012615.1-201ENST00000565797 1299 ntBASIC19.15■□□□□ 0.66
CLDN23Q96B33 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLDN23Q96B33 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms