Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCER1Q8TC90 HLA-B-256ENST00000639848 1089 ntBASIC28.62■■■□□ 2.17
CCER1Q8TC90 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
CCER1Q8TC90 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCER1Q8TC90 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
CCER1Q8TC90 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC28.62■■■□□ 2.17
CCER1Q8TC90 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCER1Q8TC90 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCER1Q8TC90 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCER1Q8TC90 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC28.62■■■□□ 2.17
CCER1Q8TC90 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC28.61■■■□□ 2.17
CCER1Q8TC90 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCER1Q8TC90 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
CCER1Q8TC90 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CCER1Q8TC90 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCER1Q8TC90 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCER1Q8TC90 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CCER1Q8TC90 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.61■■■□□ 2.17
CCER1Q8TC90 AC097658.1-201ENST00000475555 843 ntBASIC28.61■■■□□ 2.17
CCER1Q8TC90 NME1-207ENST00000480143 964 ntTSL 2 BASIC28.61■■■□□ 2.17
CCER1Q8TC90 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC28.61■■■□□ 2.17
CCER1Q8TC90 MIR4758-201ENST00000577688 71 ntBASIC28.61■■■□□ 2.17
CCER1Q8TC90 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCER1Q8TC90 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCER1Q8TC90 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CCER1Q8TC90 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCER1Q8TC90 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC28.61■■■□□ 2.17
CCER1Q8TC90 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC28.61■■■□□ 2.17
CCER1Q8TC90 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CCER1Q8TC90 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
CCER1Q8TC90 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 PNMA6B-201ENST00000538162 1200 ntBASIC28.6■■■□□ 2.17
CCER1Q8TC90 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
CCER1Q8TC90 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CCER1Q8TC90 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CCER1Q8TC90 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CCER1Q8TC90 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCER1Q8TC90 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCER1Q8TC90 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCER1Q8TC90 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
CCER1Q8TC90 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC28.59■■■□□ 2.17
CCER1Q8TC90 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCER1Q8TC90 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC28.59■■■□□ 2.17
CCER1Q8TC90 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC28.59■■■□□ 2.17
CCER1Q8TC90 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CCER1Q8TC90 MAP2K4P1-201ENST00000438453 1195 ntBASIC28.59■■■□□ 2.17
CCER1Q8TC90 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCER1Q8TC90 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC28.59■■■□□ 2.17
CCER1Q8TC90 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
CCER1Q8TC90 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CCER1Q8TC90 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC28.59■■■□□ 2.17
CCER1Q8TC90 AL031598.1-201ENST00000561511 1773 ntBASIC28.59■■■□□ 2.17
CCER1Q8TC90 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC28.59■■■□□ 2.17
CCER1Q8TC90 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCER1Q8TC90 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCER1Q8TC90 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 WIZP1-201ENST00000531444 2299 ntBASIC28.58■■■□□ 2.17
CCER1Q8TC90 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
CCER1Q8TC90 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC28.58■■■□□ 2.17
CCER1Q8TC90 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
CCER1Q8TC90 MIR935-201ENST00000401179 91 ntBASIC28.58■■■□□ 2.17
CCER1Q8TC90 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC28.58■■■□□ 2.17
CCER1Q8TC90 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 MAX-217ENST00000557277 728 ntTSL 3 BASIC28.58■■■□□ 2.17
CCER1Q8TC90 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC28.58■■■□□ 2.17
CCER1Q8TC90 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC28.58■■■□□ 2.17
CCER1Q8TC90 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
CCER1Q8TC90 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCER1Q8TC90 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC28.58■■■□□ 2.17
CCER1Q8TC90 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
CCER1Q8TC90 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
CCER1Q8TC90 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
CCER1Q8TC90 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
CCER1Q8TC90 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CCER1Q8TC90 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
CCER1Q8TC90 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC28.57■■■□□ 2.16
CCER1Q8TC90 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC28.57■■■□□ 2.16
CCER1Q8TC90 AC120498.8-201ENST00000614275 531 ntBASIC28.57■■■□□ 2.16
CCER1Q8TC90 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CCER1Q8TC90 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CCER1Q8TC90 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC28.57■■■□□ 2.16
CCER1Q8TC90 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms