Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PCDH19Q8TAB3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDH19Q8TAB3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH19Q8TAB3 KRT8P41-201ENST00000533985 1514 ntBASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH19Q8TAB3 AC093503.3-201ENST00000624917 2352 ntBASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 HTR7P1-201ENST00000538670 1336 ntBASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 Z85996.1-201ENST00000494644 937 ntBASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 AL445675.2-201ENST00000620291 557 ntBASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH19Q8TAB3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 AC006333.2-201ENST00000607957 2099 ntBASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 AL020996.1-203ENST00000536896 2307 ntBASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 MIR718-201ENST00000390190 70 ntBASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 NIFKP9-201ENST00000419265 221 ntBASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH19Q8TAB3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms