Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 AC141586.3-201ENST00000562166 1838 ntBASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAM1L1Q8N609 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 AC005332.7-201ENST00000614046 2005 ntBASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 AL390955.1-201ENST00000428694 934 ntBASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 AC073912.3-201ENST00000624414 853 ntBASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAM1L1Q8N609 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAM1L1Q8N609 AC116562.4-201ENST00000641316 2276 ntBASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAM1L1Q8N609 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms