Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 AC087499.1-201ENST00000418141 1075 ntBASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 PRSS44-201ENST00000515154 1146 ntBASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 CKBP1-201ENST00000565489 1086 ntBASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C9orf40Q8IXQ3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 AC005332.7-201ENST00000614046 2005 ntBASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.71■□□□□ 0.43
C9orf40Q8IXQ3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
C9orf40Q8IXQ3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 AC141586.3-201ENST00000562166 1838 ntBASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C9orf40Q8IXQ3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C9orf40Q8IXQ3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms