Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DHX40Q8IX18 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.33■■□□□ 1
DHX40Q8IX18 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DHX40Q8IX18 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.32■■□□□ 1
DHX40Q8IX18 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.32■■□□□ 1
DHX40Q8IX18 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.32■■□□□ 1
DHX40Q8IX18 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
DHX40Q8IX18 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
DHX40Q8IX18 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DHX40Q8IX18 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
DHX40Q8IX18 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
DHX40Q8IX18 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.32■■□□□ 1
DHX40Q8IX18 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.32■■□□□ 1
DHX40Q8IX18 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
DHX40Q8IX18 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.31■■□□□ 1
DHX40Q8IX18 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.31■■□□□ 1
DHX40Q8IX18 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
DHX40Q8IX18 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.31■■□□□ 1
DHX40Q8IX18 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.31■■□□□ 1
DHX40Q8IX18 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.31■■□□□ 1
DHX40Q8IX18 AC006557.6-201ENST00000623071 864 ntBASIC21.31■■□□□ 1
DHX40Q8IX18 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 AC068880.1-201ENST00000507289 2297 ntBASIC21.31■■□□□ 1
DHX40Q8IX18 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.31■■□□□ 1
DHX40Q8IX18 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.31■■□□□ 1
DHX40Q8IX18 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DHX40Q8IX18 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
DHX40Q8IX18 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DHX40Q8IX18 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.3■■□□□ 1
DHX40Q8IX18 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.3■■□□□ 1
DHX40Q8IX18 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.3■■□□□ 1
DHX40Q8IX18 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.3■■□□□ 1
DHX40Q8IX18 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DHX40Q8IX18 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DHX40Q8IX18 GUSBP6-202ENST00000438529 1198 ntBASIC21.3■■□□□ 1
DHX40Q8IX18 RPS2P52-201ENST00000469610 820 ntBASIC21.3■■□□□ 1
DHX40Q8IX18 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DHX40Q8IX18 AF201337.1-201ENST00000520239 748 ntBASIC21.3■■□□□ 1
DHX40Q8IX18 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.3■■□□□ 1
DHX40Q8IX18 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.3■■□□□ 1
DHX40Q8IX18 AC105036.2-201ENST00000569468 176 ntBASIC21.3■■□□□ 1
DHX40Q8IX18 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DHX40Q8IX18 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.3■■□□□ 1
DHX40Q8IX18 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
DHX40Q8IX18 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DHX40Q8IX18 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DHX40Q8IX18 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DHX40Q8IX18 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
DHX40Q8IX18 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 MKRN4P-201ENST00000444706 1521 ntBASIC21.29■■□□□ 1
DHX40Q8IX18 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.29■■□□□ 1
DHX40Q8IX18 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.29■■□□□ 1
DHX40Q8IX18 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.29■■□□□ 1
DHX40Q8IX18 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 SLC29A4P1-201ENST00000398760 971 ntBASIC21.29■■□□□ 1
DHX40Q8IX18 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.29■■□□□ 1
DHX40Q8IX18 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.29■■□□□ 1
DHX40Q8IX18 BX276092.2-201ENST00000417668 665 ntBASIC21.29■■□□□ 1
DHX40Q8IX18 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DHX40Q8IX18 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.29■■□□□ 1
DHX40Q8IX18 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms