Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 RNA5SP413-201ENST00000516373 109 ntBASIC17.06■□□□□ 0.32
LRRC28Q86X40 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC28Q86X40 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC28Q86X40 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC28Q86X40 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC28Q86X40 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC28Q86X40 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC28Q86X40 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 AL133373.2-201ENST00000623187 2828 ntBASIC17.04■□□□□ 0.32
LRRC28Q86X40 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LRRC28Q86X40 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LRRC28Q86X40 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRC28Q86X40 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC28Q86X40 C2orf69P4-201ENST00000565394 541 ntBASIC17.04■□□□□ 0.32
LRRC28Q86X40 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC28Q86X40 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRRC28Q86X40 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 NOC2LP2-201ENST00000407594 1944 ntBASIC17.03■□□□□ 0.32
LRRC28Q86X40 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC28Q86X40 WIZP1-201ENST00000531444 2299 ntBASIC17.03■□□□□ 0.32
LRRC28Q86X40 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LRRC28Q86X40 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms