Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 NUDT16P1-203ENST00000513809 620 ntBASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 AC026271.3-201ENST00000571884 352 ntBASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 AC005332.7-201ENST00000614046 2005 ntBASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 BX323043.1-201ENST00000641006 1765 ntBASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 KRT8P41-201ENST00000533985 1514 ntBASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 AC026471.5-201ENST00000615068 467 ntBASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD3Q7Z3D4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 RCC2P6-201ENST00000526625 1557 ntBASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.27■□□□□ 0.67
LYSMD3Q7Z3D4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 AC011506.1-201ENST00000474329 610 ntBASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 AC098818.2-201ENST00000564925 2320 ntBASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LYSMD3Q7Z3D4 KRT17P2-201ENST00000300992 1314 ntBASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms