Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 AC105036.2-201ENST00000569468 176 ntBASIC17.34■□□□□ 0.37
SHFQ7M4L6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 AL390961.4-201ENST00000623958 2535 ntBASIC17.34■□□□□ 0.37
SHFQ7M4L6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHFQ7M4L6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHFQ7M4L6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SHFQ7M4L6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHFQ7M4L6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.33■□□□□ 0.37
SHFQ7M4L6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHFQ7M4L6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHFQ7M4L6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHFQ7M4L6 ZNF815P-204ENST00000434898 1737 ntBASIC17.33■□□□□ 0.37
SHFQ7M4L6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHFQ7M4L6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SHFQ7M4L6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SHFQ7M4L6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHFQ7M4L6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.33■□□□□ 0.37
SHFQ7M4L6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHFQ7M4L6 AL133373.2-201ENST00000623187 2828 ntBASIC17.33■□□□□ 0.36
SHFQ7M4L6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHFQ7M4L6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
SHFQ7M4L6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.33■□□□□ 0.36
SHFQ7M4L6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.33■□□□□ 0.36
SHFQ7M4L6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHFQ7M4L6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.33■□□□□ 0.36
SHFQ7M4L6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHFQ7M4L6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.33■□□□□ 0.36
SHFQ7M4L6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SHFQ7M4L6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHFQ7M4L6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHFQ7M4L6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SHFQ7M4L6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHFQ7M4L6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHFQ7M4L6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 AC073111.5-205ENST00000641717 521 ntBASIC17.32■□□□□ 0.36
SHFQ7M4L6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.32■□□□□ 0.36
SHFQ7M4L6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHFQ7M4L6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHFQ7M4L6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHFQ7M4L6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHFQ7M4L6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHFQ7M4L6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHFQ7M4L6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHFQ7M4L6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHFQ7M4L6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHFQ7M4L6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 BX276092.2-201ENST00000417668 665 ntBASIC17.31■□□□□ 0.36
SHFQ7M4L6 AC073210.2-201ENST00000430369 194 ntBASIC17.31■□□□□ 0.36
SHFQ7M4L6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SHFQ7M4L6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHFQ7M4L6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms