Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAPH1Q70E73 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAPH1Q70E73 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RAPH1Q70E73 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.26■□□□□ 0.67
RAPH1Q70E73 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RAPH1Q70E73 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAPH1Q70E73 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.26■□□□□ 0.67
RAPH1Q70E73 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.26■□□□□ 0.67
RAPH1Q70E73 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.26■□□□□ 0.67
RAPH1Q70E73 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.26■□□□□ 0.67
RAPH1Q70E73 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAPH1Q70E73 AL049812.1-201ENST00000432563 2267 ntBASIC19.26■□□□□ 0.67
RAPH1Q70E73 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 AP006587.1-201ENST00000534129 1502 ntBASIC19.25■□□□□ 0.67
RAPH1Q70E73 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.25■□□□□ 0.67
RAPH1Q70E73 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 MIR4758-201ENST00000577688 71 ntBASIC19.25■□□□□ 0.67
RAPH1Q70E73 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAPH1Q70E73 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAPH1Q70E73 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 AC097658.1-201ENST00000475555 843 ntBASIC19.24■□□□□ 0.67
RAPH1Q70E73 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.24■□□□□ 0.67
RAPH1Q70E73 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 AL121906.2-201ENST00000621597 723 ntBASIC19.24■□□□□ 0.67
RAPH1Q70E73 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAPH1Q70E73 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAPH1Q70E73 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RAPH1Q70E73 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
RAPH1Q70E73 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RAPH1Q70E73 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAPH1Q70E73 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.23■□□□□ 0.67
RAPH1Q70E73 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAPH1Q70E73 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
RAPH1Q70E73 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.23■□□□□ 0.67
RAPH1Q70E73 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.23■□□□□ 0.67
RAPH1Q70E73 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAPH1Q70E73 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAPH1Q70E73 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAPH1Q70E73 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAPH1Q70E73 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAPH1Q70E73 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAPH1Q70E73 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms