Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 RPS2P52-201ENST00000469610 820 ntBASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 AC008403.3-201ENST00000598924 454 ntBASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 PHGDH-210ENST00000641115 1638 ntBASIC17.14■□□□□ 0.33
RFPL4BQ6ZWI9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL4BQ6ZWI9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 ESRRAP1-201ENST00000400596 1257 ntBASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 AC026366.1-201ENST00000488803 879 ntBASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 AC120498.8-201ENST00000614275 531 ntBASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RFPL4BQ6ZWI9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL4BQ6ZWI9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.1■□□□□ 0.33
RFPL4BQ6ZWI9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RFPL4BQ6ZWI9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms