Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
FOXR1Q6PIV2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 FAM197Y4-202ENST00000622692 608 ntBASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 WIZP1-201ENST00000531444 2299 ntBASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXR1Q6PIV2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
FOXR1Q6PIV2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 CDV3P1-201ENST00000471403 739 ntBASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXR1Q6PIV2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms