Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NIPAL3Q6P499 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NIPAL3Q6P499 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.45■□□□□ 0.38
NIPAL3Q6P499 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 KRT18P29-201ENST00000397031 1267 ntBASIC17.44■□□□□ 0.38
NIPAL3Q6P499 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 MTDHP1-201ENST00000605323 784 ntBASIC17.44■□□□□ 0.38
NIPAL3Q6P499 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 AC006333.2-201ENST00000607957 2099 ntBASIC17.44■□□□□ 0.38
NIPAL3Q6P499 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NIPAL3Q6P499 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 AL023875.1-201ENST00000640777 796 ntBASIC17.43■□□□□ 0.38
NIPAL3Q6P499 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NIPAL3Q6P499 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms