Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 LINC01126-201ENST00000623515 1646 ntBASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDPF1Q6NVV7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
CDPF1Q6NVV7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.58□□□□□ -0.07
CDPF1Q6NVV7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDPF1Q6NVV7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDPF1Q6NVV7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 AC003102.1-202ENST00000563394 1796 ntBASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDPF1Q6NVV7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 ABALON-201ENST00000629058 1903 ntBASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 MIR572-201ENST00000384983 95 ntBASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 SLC47A1P1-202ENST00000449666 945 ntBASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDPF1Q6NVV7 AC090340.1-201ENST00000620778 4980 ntBASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.56□□□□□ -0.08
CDPF1Q6NVV7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms