Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SWSAP1Q6NVH7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 LIN28AP1-201ENST00000429574 405 ntBASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 TSPY23P-201ENST00000440136 739 ntBASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 TSPY17P-201ENST00000450329 467 ntBASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 CA15P1-201ENST00000481698 905 ntBASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 AL353719.1-201ENST00000566847 864 ntBASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SWSAP1Q6NVH7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SWSAP1Q6NVH7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 HMGA1P5-201ENST00000412453 271 ntBASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 ATP5G1P1-201ENST00000448724 379 ntBASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 AC010653.2-201ENST00000623505 997 ntBASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SWSAP1Q6NVH7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms